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Abstract
Pollinator-driven evolution of floral traits is thought to be a major driver of angiosperm speciation and diversification. Ophrys orchids mimic female insects to lure male pollinators into pseudocopulation. This strategy, called sexual deception, is species-specific, thereby providing strong premating reproductive isolation. Identifying the genomic architecture underlying pollinator adaptation and speciation may shed light on the mechanisms of angiosperm diversification. Here, we report the 5.2 Gb chromosome-scale genome sequence of Ophrys sphegodes. We find evidence for transposable element expansion that preceded the radiation of the O. sphegodes group, and for gene duplication having contributed to the evolution of chemical mimicry. We report a highly differentiated genomic candidate region for pollinator-mediated evolution on chromosome 2. The Ophrys genome will prove useful for investigations into the repeated evolution of sexual deception, pollinator adaptation and the genomic architectures that facilitate evolutionary radiations.
Pollinator-driven evolution of floral traits is thought to be a major driver of angiosperm speciation and diversification. Here, the authors assemble the chromosome-scale genome of the sexually deceptive orchid Ophrys sphegodes and reveal insights into sexual deception and pollinator adaptation.
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1 University of Hohenheim, Department of Plant Evolutionary Biology, Institute of Biology, Stuttgart, Germany (GRID:grid.9464.f) (ISNI:0000 0001 2290 1502); University of Zurich, Department of Plant and Microbial Biology and Zürich-Basel Plant Science Centre, Zürich, Switzerland (GRID:grid.7400.3) (ISNI:0000 0004 1937 0650); University of Zurich, Department of Systematic and Evolutionary Botany and Zürich-Basel Plant Science Centre, Zürich, Switzerland (GRID:grid.7400.3) (ISNI:0000 0004 1937 0650)
2 University of Hohenheim, Department of Plant Evolutionary Biology, Institute of Biology, Stuttgart, Germany (GRID:grid.9464.f) (ISNI:0000 0001 2290 1502)
3 Laboratoire Génome et Développement des Plantes, Université Perpignan Via Domitia, Perpignan, France (GRID:grid.463998.9) (ISNI:0000 0004 0409 4059); Laboratoire Génome et Développement des Plantes, CNRS, Perpignan, France (GRID:grid.463998.9) (ISNI:0000 0004 0409 4059); Institut de Recherche pour le Développement, EMR269 MANGO, Perpignan, France (GRID:grid.4399.7) (ISNI:0000 0001 2287 9528)
4 Agroscope, Department of Methods Development and Analytics, Wädenswil, Switzerland (GRID:grid.417771.3) (ISNI:0000 0004 4681 910X)
5 University of Naples Federico II, Department of Biology, Naples, Italy (GRID:grid.4691.a) (ISNI:0000 0001 0790 385X)
6 University of Zurich, Department of Systematic and Evolutionary Botany and Zürich-Basel Plant Science Centre, Zürich, Switzerland (GRID:grid.7400.3) (ISNI:0000 0004 1937 0650)
7 Naturalis Biodiversity Centre, Leiden, The Netherlands (GRID:grid.425948.6) (ISNI:0000 0001 2159 802X); Chinese Academy of Sciences, Germplasm Bank of Wild Species, Kunming Institute of Botany, Kunming, China (GRID:grid.9227.e) (ISNI:0000000119573309)
8 University of Zurich, Department of Plant and Microbial Biology and Zürich-Basel Plant Science Centre, Zürich, Switzerland (GRID:grid.7400.3) (ISNI:0000 0004 1937 0650)
9 Naturalis Biodiversity Centre, Leiden, The Netherlands (GRID:grid.425948.6) (ISNI:0000 0001 2159 802X); German Centre for Integrative Biodiversity Research (iDiv) Halle – Jena – Leipzig, Leipzig, Germany (GRID:grid.421064.5) (ISNI:0000 0004 7470 3956)
10 University of Mainz, Institute of Organismic and Molecular Evolution, Mainz, Germany (GRID:grid.5802.f) (ISNI:0000 0001 1941 7111)
11 University of Hohenheim, Department of Plant Evolutionary Biology, Institute of Biology, Stuttgart, Germany (GRID:grid.9464.f) (ISNI:0000 0001 2290 1502); University of Zurich, Department of Systematic and Evolutionary Botany and Zürich-Basel Plant Science Centre, Zürich, Switzerland (GRID:grid.7400.3) (ISNI:0000 0004 1937 0650)